dsr2html [options] dsrfile-in [htmlfile-out]
If dsr2html reads a raw data set (DICOM data without a file format meta-header) it will attempt to guess the transfer syntax by examining the first few bytes of the file. It is not always possible to correctly guess the transfer syntax and it is better to convert a data set to a file format whenever possible (using the dcmconv utility). It is also possible to use the -f and -t[ieb] options to force dsr2html to read a dataset with a particular transfer syntax.
dsrfile-in DICOM SR input filename to be rendered htmlfile-out HTML/XHTML output filename (default: stdout)
-h --help print this help text and exit --version print version information and exit --arguments print expanded command line arguments -q --quiet quiet mode, print no warnings and errors -v --verbose verbose mode, print processing details -d --debug debug mode, print debug information -ll --log-level [l]evel: string constant (fatal, error, warn, info, debug, trace) use level l for the logger -lc --log-config [f]ilename: string use config file f for the logger
input file format: +f --read-file read file format or data set (default) +fo --read-file-only read file format only -f --read-dataset read data set without file meta information input transfer syntax: -t= --read-xfer-auto use TS recognition (default) -td --read-xfer-detect ignore TS specified in the file meta header -te --read-xfer-little read with explicit VR little endian TS -tb --read-xfer-big read with explicit VR big endian TS -ti --read-xfer-implicit read with implicit VR little endian TS
additional information: -Ip --processing-details show currently processed content item error handling: -Er --unknown-relationship accept unknown/missing relationship type -Ec --ignore-constraints ignore relationship content constraints -Ee --ignore-item-errors do not abort on content item errors, just warn (e.g. missing value type specific attributes) -Ei --skip-invalid-items skip invalid content items (incl. sub-tree) character set: +Cr --charset-require require declaration of extended charset (default) +Ca --charset-assume [c]harset: string constant (latin-1 to -5, greek, cyrillic, arabic, hebrew) assume c if undeclared extended charset found
HTML/XHTML compatibility: +H3 --html-3.2 use only HTML version 3.2 compatible features +H4 --html-4.0 allow all HTML version 4.01 features (default) +X1 --xhtml-1.1 comply with XHTML version 1.1 specification +Hd --add-document-type add reference to SGML document type definition cascading style sheet (CSS), not with HTML 3.2: +Sr --css-reference URL: string add reference to specified CSS to document +Sf --css-file [f]ilename: string embed content of specified CSS into document general rendering: +Ri --expand-inline expand short content items inline (default) -Ri --never-expand-inline never expand content items inline +Ra --always-expand-inline always expand content items inline +Rd --render-full-data render full data of content items +Rt --section-title-inline render section titles inline, not separately document rendering: +Dt --document-type-title use document type as document title (default) +Dp --patient-info-title use patient information as document title -Dh --no-document-header do not render general document information code rendering: +Ci --render-inline-codes render codes in continuous text blocks +Cn --concept-name-codes render code of concept names +Cu --numeric-unit-codes render code of numeric measurement units +Cv --code-value-unit use code value as measurement unit (default) +Cm --code-meaning-unit use code meaning as measurement unit +Cc --render-all-codes render all codes (implies +Ci, +Cn and +Cu) +Ct --code-details-tooltip render code details as a tooltip (implies +Cc)
SpectaclePrescriptionReportStorage 1.2.840.10008.5.1.4.1.1.78.6 MacularGridThicknessAndVolumeReportStorage 1.2.840.10008.5.1.4.1.1.79.1 BasicTextSRStorage 1.2.840.10008.5.1.4.1.1.88.11 EnhancedSRStorage 1.2.840.10008.5.1.4.1.1.88.22 ComprehensiveSRStorage 1.2.840.10008.5.1.4.1.1.88.33 ProcedureLogStorage 1.2.840.10008.5.1.4.1.1.88.40 MammographyCADSRStorage 1.2.840.10008.5.1.4.1.1.88.50 KeyObjectSelectionDocumentStorage 1.2.840.10008.5.1.4.1.1.88.59 ChestCADSRStorage 1.2.840.10008.5.1.4.1.1.88.65 XRayRadiationDoseSRStorage 1.2.840.10008.5.1.4.1.1.88.67 ColonCADSRStorage 1.2.840.10008.5.1.4.1.1.88.69 ImplantationPlanSRDocumentStorage 1.2.840.10008.5.1.4.1.1.88.70
In case the logging output should be written to file (optionally with logfile rotation), to syslog (Unix) or the event log (Windows) option --log-config can be used. This configuration file also allows for directing only certain messages to a particular output stream and for filtering certain messages based on the module or application where they are generated. An example configuration file is provided in <etcdir>/logger.cfg).
Command line options are distinguished from parameters by a leading '+' or '-' sign, respectively. Usually, order and position of command line options are arbitrary (i.e. they can appear anywhere). However, if options are mutually exclusive the rightmost appearance is used. This behaviour conforms to the standard evaluation rules of common Unix shells.
In addition, one or more command files can be specified using an '@' sign as a prefix to the filename (e.g. @command.txt). Such a command argument is replaced by the content of the corresponding text file (multiple whitespaces are treated as a single separator unless they appear between two quotation marks) prior to any further evaluation. Please note that a command file cannot contain another command file. This simple but effective approach allows to summarize common combinations of options/parameters and avoids longish and confusing command lines (an example is provided in file <datadir>/dumppat.txt).
The default behaviour should be preferred and the DCMDICTPATH environment variable only used when alternative data dictionaries are required. The DCMDICTPATH environment variable has the same format as the Unix shell PATH variable in that a colon (":") separates entries. On Windows systems, a semicolon (";") is used as a separator. The data dictionary code will attempt to load each file specified in the DCMDICTPATH environment variable. It is an error if no data dictionary can be loaded.